genenetwork @GeneNetwork2
GeneNetwork is a free FOSS FAIR+ web service for genetics, genomics & EHR data. Precision medicine—Like GTEx but more species, realtime stats. Since Jan 1994! joss.theoj.org/papers/10.2110… Memphis, TN Joined October 2016-
Tweets371
-
Followers174
-
Following502
-
Likes130
@erikgarrison Pangenome workshop and conference this coming week.
0
0
2
190
0
View Details
Massive overhauls of GeneNetwork databases to improve speed and to prevent table locks during updates and edits. Now using InnoDB: en.wikipedia.org/wiki/InnoDB
Terrific presentations by @flavia_villani & @AndresGuarahino in genetics course at UTHSC on the pangenome draft paper biorxiv.org/content/10.110… and paper with @erikgarrison and @v_colonna on cross-chromosome recombination in humans. Yes it happens! biorxiv.org/search/flavia%…
genenetwork retweeted
New package from our group: MetabolomicsWorkbenchAPI.jl is a Julia package to work with the Metabolomics Workbench REST service. @GeneNetwork2 @OPARProject
New package: MetabolomicsWorkbenchAPI v0.1.0 announced #JuliaLang Release notes: > - Initial release version 0.1.0 Registration: github.com/JuliaRegistrie… Repository: github.com/senresearch/Me…
Pjotr Prins, lead of GeneNetwork FOSS team headed up presentations at Tenth Anniversary of GNU Guix: 10years.guix.gnu.org/video/gnu-guix…
CHALLENGE: How to keep genetic and genomic data unidentifiable but sharable?@erikgarrison @pjotrprins and @RichardMott7)are making progress toward this key challenge in individualized health care. Pangenomes need protection too! Here is Erik’s latest privvg.github.io/2022/09/24/pra…
Several user interface upgrades and addition of icons to GeneNetwork’s main Search page today (25Sep2022). Thanks to Zach Sloan.
@sysgenschool And our four groups and their areas of focus. Of course significant complementarity and intentional overlap. And your own questions and tests. @rupertoverall @KMozhui
@sysgenschool Judea Pearl’s #Book of Why definitely worth reading if you are interested in causal modeling and the synthesis @rupertoverall mentioned in presentation. And lots of genetics too. Highly recommended. en.m.wikipedia.org/wiki/The_Book_…
GeneNetwork is working beautifully at Day 1 of @SysGenSchool More intense use coming soon.
@rupertoverall GeneNetwork holding up well @SysGenSchool
genenetwork retweeted
We develop a method for high-throughput frailty assessment using machine vision is out @NatureAging. We worked with Gary Churchill and @NathanShockCtrs This tech will enable scalable and objective aging studies. Detailed tweet to follow. rdcu.be/cTLJi
Rupert highlighting boolean networks for ageing and metabolism @sysgenschool He is using Minerva for this work. We will be test driving this week.
genenetwork retweeted
plot your data. plot your data. plot your data. plot your data. plot your data.
Cool resources for @sysgenschool from Rupert Overall are here: rupertoverall.net/software/
Cool resources for @sysgenschool from Rupert Overall are here: rupertoverall.net/software/
Great Hacker News thread on user interface design and optimization. It hard and a community effort— news.ycombinator.com/item?id=321479…
Hey GN coding team— to say but correlations are running VERY SLOWLY today, even against BXD phenotypes. What gives? Took 262 seconds. Is one process competing with another?
Worth following Albert Rapp @rappa753 . Code we might use for improved GUIs.
And more summaries from Verónica.
Camron Bryant @CamronBryantPhD
1K Followers 1K Following Cat Dad, Prof, Pharm Sci, Center for Drug Discovery, Northeastern Univ, Follow me at bluesky: https://t.co/LJH1SXOrkq
Dr.KaczorowskiLab @KaczorowskiLab
4K Followers 4K Following Professor and Elinor Levine Endowed Chair in Dementia Research at The University of Michigan. All posts reflect only my views.
🦠BortzVirologyGrou... @BortzGroup
1K Followers 2K Following Pathogenomics: University of Alaska 🏔🇺🇸 PI: Eric Bortz, PhD; WWAMI U. Washington; 🇺🇦 @KSE_UA CS/Bioinformatics #СлаваУкраїні 🦋bortz-virology
Agnieszka Golicz @AgnieszkaGolicz
530 Followers 620 Following Professor of Agrobioinformatics at Justus Liebig University
pdru @dru_phil
21 Followers 254 Following
Thadshch @Thadshch
0 Followers 7 Following
Emma Gnatowski @gnatowskie
34 Followers 91 Following PhD Candidate in Pharmacology and Toxicology at Virginia Commonwealth University studying candidate genes implicated in alcohol use disorder 🧠🍷 🧬
omid chatrabgoun @chatrabgoun_o
23 Followers 260 Following Dr Omid Chatrabgoun is an Assistant Professor in Data Science and AI at Coventry University, UK.
Dimitry Krementsov @DKrementsov
514 Followers 495 Following Associate Prof. at BHSC #UVM. Active researcher and educator in immunology and microbiology. Views are my own.
David S. Reiner @chronicgiardia
9 Followers 119 Following
EAAPofficial @EAAPofficial
3K Followers 943 Following The International network for animal science and livestock industry for Europe 🇪🇺 #eaap
Kauthar Omar @K__Omar
69 Followers 204 Following Bioinformatics enthusiasts الحياة مغامرة جريئة أو لا شيء على الإطلاق
ontheway @hzau_agis
0 Followers 8 Following
Max Lam @maxzylam
228 Followers 509 Following PI - Neuropsychiatric Genomics Laboratory @ IMH; Deputy Scientific Director PRECISE-SG100K National Precision Medicine Initiative
Renee (Hui Xin) Ng �... @_slowlettuce
352 Followers 1K Following data, computation, biology 🌊 #FirstGen 한국어 공부하고 있어요 ❤️ math + languages
Javi Botella @javi_iup
1K Followers 2K Following Postdoctoral Researcher @Unil - Research interests in Mitochondria, Innate Immunity, Metabolism & Exercise
Behavioral and Brain ... @JournalBbf
282 Followers 728 Following We welcome manuscripts providing insight into the mechanisms underlying behavior and brain (dys)function. Editor: Wim E. Crusio. Publisher: BioMed Central.
Human Pangenome Refer... @HumanPangenome
3K Followers 2K Following Different Human References Drive Genomic Discoveries for Everyone
Dr. Verónica Espinoz... @Verukita1
5K Followers 3K Following 👥PhD Humanities 🧠 MSc Neurobiology 🧪BSc Chemistry #networkscience #gephi #neuroscience #chemistry #digitalhumanities #datasceince
Siamak Yousefi @SiamakYousefi6
150 Followers 57 Following @Bascom Palmer Eye Institute, @Electrical and Computer Engineering, @University of Miami, Director, Data Mining and Machine Learning (DM2L) lab.
TBK Reddy @tbk_reddy
80 Followers 106 Following Genomic Standards Group Lead. Bioinformatics, Biological Databases, Microbiome, Metadata Management, Controlled Vocabularies and Ontologies. Views are my own.
Claudia Colina, PhD @ClaudiaColina16
468 Followers 3K Following 🇻🇪+🇮🇹+🇺🇸 and my ❤️ 🇵🇷. All in science, electrophysiologist, reviewer and scientific content creator. #FirstGen #Latina Opinions∈own
Emily Baltz, Ph.D. @ebaltz
776 Followers 2K Following mostly tweeting neuro, mental health, and social justice. Indy - UIUC - San Diego. she/her
Complex Trait Communi... @CTC_RG
48 Followers 34 Following The CTC is an international organization that brings together multidisciplinary scientists - geneticists, bioinformaticians interested in research.
Amir @jafarii_amir
192 Followers 2K Following
José Jaime Martínez... @JJaimeMarti
748 Followers 7K Following Husband, Science, BSc. at @unam_fesz and MSc. at @UNAM_MX, PhD at @UJAT, Postdoc at @Yale
James C Fleet @fleet_james
34 Followers 73 Following
Anuj Srivastava @srivas_a
9 Followers 18 Following Associate Director Bioinformatics at the Jackson laboratory , pdx informatics, sports enthusiast , he/him, all opinions are my own
Hakan Güntürkün @hakangunturkun
382 Followers 227 Following Co-founder & Head of AI @arcade_ai | e2e AI/ML | Co-founder @pentalitha
Courtney L. Hatton @future_DrHatton
665 Followers 4K Following PhD student @UMassChan. Studying genetics 🧬, bioinformatics & adipose tissue with @MooreJillE & @CorveraLab. #WomeninSTEM She/Her (opinions are my own)
octodon.social/@cwebb... @dustyweb
2K Followers 1K Following CTO of @spritelyinst, here to fix the Internet. ActivityPub co-author, and co-host of @fossandcrafts. She/they; @mlemweb's dorky wife. https://t.co/2ze0wTfa11
Institute for Genome ... @GenomeScience
12K Followers 6K Following Leading-edge research in all-things 'omics: #microbiomes, #neurogenomics, #genomics, #fungi, #parasites, & #cancer. Also: @genomescience.bsky.social
Joanne Berghout @joanneberghout
812 Followers 1K Following Excited by anything computational genetics or rare disease. Also food. Ex-academic, ex-Pfizer, and now at NIH/NIAID; all opinions my own. She/her/Dr. 🇨🇦
BioVis @biovis_net
1K Followers 2K Following Biological Data Visualization. Next session July @ismb, Lyon, France. Tweets by BioVis team: @SocknessRogers & @helenajambor
robertmkirkpatrick @robertmkirkpat1
167 Followers 371 Following Psychology, genetics, statistics/psychometrics, computing/technology, free/libre/open-source software, retro video games.
Dana Zeid @zeid_dana
66 Followers 200 Following Postdoc at Temple U,Philadelphia. Interested in transgenerational epigenetic inheritance, ethical science, & optimization of animal behavioral models❤️🐀she/her
Alex Waldman, MD, DPh... @A_Waldman
983 Followers 3K Following PGY1 Neurosurgery Resident @MGUHNeurosurg | Emory MD/PhD @EmoryMSTP | NIH Oxford Scholar @NIHOxCam @NDCNOxford | @A_P_S_A Past President | He/Him 🏳️🌈
Liza Makowski Lab @MakowskiLab
443 Followers 473 Following Scientist, Mentor, Mom of 3, Wife of Cancer Center Director. All views, post, and opinions are my own.
Tim @biotim
843 Followers 6K Following Biology and Evolution. Data science and Bioinformatics. Cool animal photos.
Özlem @OzlemBahar18
19 Followers 138 Following
SMART Initiative @UT_SMART
260 Followers 2K Following The Substance Misuse and Addiction Resource for Tennessee (SMART) Policy Network was created in 2020 to support UT's efforts around substance misuse and abuse.
Candice @candiceleilani
150 Followers 716 Following Ph.D. student with @Kelley__Harris studying mutation spectrum variation & evolution 🧬 // they hers // @MCBSeattle @UAW4121
TSE Systems @TSESystems
686 Followers 4K Following Trusted leader in metabolic, behavioral, physiological, and inhalation research.
gkm @maina_gidi
259 Followers 3K Following #softwareengineer 💻, #thepragmaticprogrammer👨🏽💻, #python, #typescript, #vimfu, #linux, #simplicity, #greenenergy, #bethebest 🙏🏽, #254 🇰🇪, #F1🏁
Dr. Robyn L. Ball (@�... @RobynLBall
276 Followers 713 Following Statistician/Data Scientist/Computational Scientist -views are my own-
Josh Dubnau 🇵🇸 @joshdubnau
4K Followers 1K Following neurogenetics, transposons, flies, oenophile, foodie, husband, father, kayaker, progressive unionist and a hemorrhoid in the A$$ of administration.
Camron Bryant @CamronBryantPhD
1K Followers 1K Following Cat Dad, Prof, Pharm Sci, Center for Drug Discovery, Northeastern Univ, Follow me at bluesky: https://t.co/LJH1SXOrkq
Ewan Birney @ewanbirney
47K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
Dr.KaczorowskiLab @KaczorowskiLab
4K Followers 4K Following Professor and Elinor Levine Endowed Chair in Dementia Research at The University of Michigan. All posts reflect only my views.
Adam Phillippy @aphillippy
16K Followers 907 Following Finished a human genome, working on a few more 👨💻 Posts are my own
Matthew Hahn @3rdreviewer
12K Followers 471 Following Population geneticist. Hobbies include: two kids.
Vince Buffalo @vsbuffalo
35K Followers 3K Following Scientist at IDM ♥s epidemiology, running, prob+stats, 🦀/🐫, fly fishing, greyhounds, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Jennifer Trowbridge @TrowbridgeLab
6K Followers 3K Following Professor & Dattels Family Chair at The Jackson Laboratory @jacksonlab studying hematopoietic stem cell biology, aging & cancer. 🇨🇦🇺🇸 Tweets are my own.
Andrew Kern @pastramimachine
14K Followers 3K Following Evolution, population genetics, machine learning. rhythm section.
Kevin Mitchell @WiringTheBrain
41K Followers 2K Following Neurogeneticist interested in the relations between genes, brains, and minds. Author of INNATE (2018), FREE AGENTS (2023). https://t.co/PdgAxi6myV
Imad Damaj @DamajLab
576 Followers 331 Following VCU Pain And neuropathy Research Program Neuropharmacology of drug addiction and pain- nicotinic Lab
Aaron Quinlan @aaronquinlan
16K Followers 1K Following All things genome mutation, software for genomic discovery. Chairperson of @UUGenetics Co-director, DELPHI Data Science Init (he/him) https://t.co/6GKjALLFfk
Manolis Kellis @manoliskellis
49K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
Eric Fauman (he/him) @Eric_Fauman
6K Followers 248 Following GWAS whisperer 'Nothing in biology makes sense except in the light of evolution' DMs open Executive Director, Integrative Biology @Pfizer
The Jackson Laborator... @jacksonlab
21K Followers 7K Following Est. 1929, JAX is a non-profit scientific research institute specializing in 🧬 genetics, 🧮 genomics & 🐁 mouse models of disease. https://t.co/SrWBTGUJ00
Claudia Colina, PhD @ClaudiaColina16
468 Followers 3K Following 🇻🇪+🇮🇹+🇺🇸 and my ❤️ 🇵🇷. All in science, electrophysiologist, reviewer and scientific content creator. #FirstGen #Latina Opinions∈own
Parul Johri @Johri_Parul
1K Followers 465 Following Assistant Professor, Dept of Biology at UNC, Chapel Hill. Population genetics.
Tim @biotim
843 Followers 6K Following Biology and Evolution. Data science and Bioinformatics. Cool animal photos.
Alex Waldman, MD, DPh... @A_Waldman
983 Followers 3K Following PGY1 Neurosurgery Resident @MGUHNeurosurg | Emory MD/PhD @EmoryMSTP | NIH Oxford Scholar @NIHOxCam @NDCNOxford | @A_P_S_A Past President | He/Him 🏳️🌈
Dana Zeid @zeid_dana
66 Followers 200 Following Postdoc at Temple U,Philadelphia. Interested in transgenerational epigenetic inheritance, ethical science, & optimization of animal behavioral models❤️🐀she/her
Institute for Genome ... @GenomeScience
12K Followers 6K Following Leading-edge research in all-things 'omics: #microbiomes, #neurogenomics, #genomics, #fungi, #parasites, & #cancer. Also: @genomescience.bsky.social
octodon.social/@cwebb... @dustyweb
2K Followers 1K Following CTO of @spritelyinst, here to fix the Internet. ActivityPub co-author, and co-host of @fossandcrafts. She/they; @mlemweb's dorky wife. https://t.co/2ze0wTfa11
Courtney L. Hatton @future_DrHatton
665 Followers 4K Following PhD student @UMassChan. Studying genetics 🧬, bioinformatics & adipose tissue with @MooreJillE & @CorveraLab. #WomeninSTEM She/Her (opinions are my own)
James C Fleet @fleet_james
34 Followers 73 Following
José Jaime Martínez... @JJaimeMarti
748 Followers 7K Following Husband, Science, BSc. at @unam_fesz and MSc. at @UNAM_MX, PhD at @UJAT, Postdoc at @Yale
Amir @jafarii_amir
192 Followers 2K Following
Complex Trait Communi... @CTC_RG
48 Followers 34 Following The CTC is an international organization that brings together multidisciplinary scientists - geneticists, bioinformaticians interested in research.
Emily Baltz, Ph.D. @ebaltz
776 Followers 2K Following mostly tweeting neuro, mental health, and social justice. Indy - UIUC - San Diego. she/her
Javi Botella @javi_iup
1K Followers 2K Following Postdoctoral Researcher @Unil - Research interests in Mitochondria, Innate Immunity, Metabolism & Exercise
Beat Bapst @bbapst
277 Followers 336 Following Animal breeder, geneticist @QualitasAG ; MTB; hiker; cooking; mountains ... and interested in world affairs
Nathaniel Chin @NathanielChinMD
432 Followers 273 Following Memory clinic doc @UWHealth. #Alzheimers and #dementia investigator @WisconsinADRC. Host of #DementiaMatters podcast. Grad of @uwsmph. #medtwitter #somedocs
National Alzheimer's ... @NACCData
3K Followers 3K Following NACC collects, harmonizes, and shares Alzheimer's disease research data from 37 NIA funded Alzheimer's Disease Research Centers across the US.
Siamak Yousefi @SiamakYousefi6
150 Followers 57 Following @Bascom Palmer Eye Institute, @Electrical and Computer Engineering, @University of Miami, Director, Data Mining and Machine Learning (DM2L) lab.
Albert Rapp @rappa753
12K Followers 120 Following 🎓 Math PhD student & freelancer 👨🏫 Bite-sized insights on dataviz, web dev & data science with R at https://t.co/M34b5BzHTD
Dr. Verónica Espinoz... @Verukita1
5K Followers 3K Following 👥PhD Humanities 🧠 MSc Neurobiology 🧪BSc Chemistry #networkscience #gephi #neuroscience #chemistry #digitalhumanities #datasceince
Hakan Güntürkün @hakangunturkun
382 Followers 227 Following Co-founder & Head of AI @arcade_ai | e2e AI/ML | Co-founder @pentalitha
Elliot Hershberg @ElliotHershberg
19K Followers 961 Following Partner @AmplifyPartners, writing https://t.co/LSbi0EEiHU
Human Pangenome Refer... @HumanPangenome
3K Followers 2K Following Different Human References Drive Genomic Discoveries for Everyone
Ursula von der Leyen @vonderleyen
1.7M Followers 278 Following President of the @EU_Commission. Mother of seven. Brussels-born. European by heart. 🇪🇺
Duty To Warn 🔉 @duty2warn
430K Followers 9K Following Mental Health professionals warning about Trump. Catch our Podcast, "Shrinking Trump" on the Really American Network with Dr. John Gartner and Dr. Harry Segal
Anders Östlund @andersostlund
221K Followers 15K Following
The Kyiv Independent @KyivIndependent
1.9M Followers 38 Following Independent English-language journalism in Ukraine. Become a member: https://t.co/ZnSQWYU6Xx
Olga Tokariuk @olgatokariuk
356K Followers 2K Following Academy Associate @ChathamHouse. @CEPA non-resident fellow. Opinions my own
The White House 46 Ar... @WhiteHouse46
8.5M Followers 6 Following This is an archive of a Biden administration account, maintained by the National Archives and Records Administration.
Bellingcat @bellingcat
719K Followers 74 Following Support our charity https://t.co/XMTKIEDiTB Buy our book: https://t.co/2JiuWFfTpO Follow us: https://t.co/LPUEQI8TdZ
John Scott-Railton @jsrailton
166K Followers 3K Following Chasing digital badness. Sr. Researcher @citizenlab @UofT @munkschool. Fmr.Ed. @SecPlanner. Tweets mine. Other platforms @jsrailton too.
Defense of Ukraine @DefenceU
2.2M Followers 93 Following Official page of the Ministry of Defense of Ukraine 🇺🇦 Minister: @FedorovMykhailo
Liza Makowski Lab @MakowskiLab
443 Followers 473 Following Scientist, Mentor, Mom of 3, Wife of Cancer Center Director. All views, post, and opinions are my own.
Marissa Ehringer @ehringermaeiii
70 Followers 34 Following Behavioral geneticist, Mother of two boys, Jazzercise instructor, Nature enthusiast
Michael Schatz @mike_schatz
16K Followers 1K Following Bloomberg Distinguished Professor of Computer Science and Biology at Johns Hopkins University
Nick Loman @pathogenomenick
34K Followers 2K Following Professor of Microbial Genomics and Bioinformatics @unibirmingham, @MRCClimb, Sr. Genomics Adviser @UKHSA, CSO @microbesNG
Southern Alliance for... @cleanenergyorg
6K Followers 4K Following SACE promotes responsible and equitable energy choices to address #climatechange and ensure clean, safe, and healthy communities throughout the Southeast.
CityofMem_Media @CityofMem_Media
2K Followers 28 Following Official Twitter account for the @CityofMemphis Office of Communications. Follow for timely updates and important news.
Jonathan Mosley @JDMosley_Moses
403 Followers 406 Following Physician Scientist interested in how genetics impact health and disease. Opinions my own (and the puppet master).
Miko Dai @mikomikomi_dr
148 Followers 341 Following Neuroscience PhD student @papouinlab @WUSTLdbbs | @Middlebury ’2020 🐁🧠🧬
UTHSC College of Medi... @UTHSCMedicine
901 Followers 320 Following The University of Tennessee Health Science Center College of Medicine offers programs leading to the Doctor of Medicine (M.D.) degree.
SMART Initiative @UT_SMART
260 Followers 2K Following The Substance Misuse and Addiction Resource for Tennessee (SMART) Policy Network was created in 2020 to support UT's efforts around substance misuse and abuse.
Vishnu Hosur @vishnu_hosur
39 Followers 66 Following
Gihan Jayasinghe - Fi... @GihanJaya
227 Followers 1K Following Evolution, development and genomics of complex behaviors. PhD student in the Saltz lab @RiceUniversity | Prev. @ColomboUni 🇱🇰. Find me on BlueskyYou might like
Vivek Kumar
@Vivekdna
1K Followers
Danny Arends
@DannyArends
573 Followers
Sarah Heuer, PhD
@Heuerwego
417 Followers