ENCODE DCC @EncodeDCC
The Data Coordinating Center for the Encyclopedia of DNA Elements. Free, accessible data at your fingertips. encodeproject.org Stanford, CA Joined December 2011-
Tweets973
-
Followers3K
-
Following484
-
Likes342
ENCODE DCC retweeted
Excited to announce that "The EN-TEx resource of personal epigenomes & variant impact models" just came out: Cell.com/cell/fulltext/…. The paper represents the culmination of many years of work by >100 authors & has lots of useful information about allele-specific activity.
7
101
221
50K
40
View Details
ENCODE DCC retweeted
Does anybody know if chromatin segmentation (either ChromHMM or Segway) for NIH3T3 cells is available? I admit I’m not able to find it (mm10, possibly)
ENCODE DCC retweeted
Read about the @4DNucleome data portal, now out in @NatureComms #FAIRdata nature.com/articles/s4146…
Join our May 10 SeqSPACE webinar to hear about @NIH_ORIP Precision Disease Modeling Initiative and its functional & phenotypic analysis of disease-causing variants in model organisms. Details: epi.grants.cancer.gov/events/seqSPAC… @bcmhouston @jacksonlab @UABNews
ENCODE DCC retweeted
Are you running the data or are you run over by petabytes of data? These ten simple rules will help you to tame large-scale datasets. Read more: ow.ly/BnnS50HUP3U @Chai_Arkarachai #bioinformatics #genomics #BigData
ENCODE DCC retweeted
Supporting Talented Early Career Researchers in Genomics RFA-HG-22-001 grants.nih.gov/grants/guide/r…
ENCODE DCC retweeted
Looking forward to seeing everyone (virtually) and hearing about all the exciting new research at the @4DNucleome annual meeting today! DCIC demo session tomorrow (Thursday) at 11:53am PST!
ENCODE DCC retweeted
**RFA Announcement** Supporting Talented Early Career Researchers in Genomics RFA-HG-22-001 For more information: ow.ly/7kTc50H6bZq
ENCODE DCC retweeted
Model organism databases are in jeopardy | Development | The Company of Biologists journals.biologists.com/dev/article/14…
This is super important
Without NIH support ALL model organism databases-a crucial component of biomedical research-are threatened. Make your voice heard: surveymonkey.com/r/5NGLNNJ. Background info @ASCBiology @GeneticsGSA :ascb.org/wp-content/upl…
ENCODE DCC retweeted
ENCODE DCC retweeted
Interested in genome-wide profiles of chromatin accessibility? Perform quality control and signal processing to produce alignments and measures of enrichment with the ENCODE ATAC-seq Pipeline, released on the Seven Bridges Cancer Genomics Cloud platform. @ENCODE_NIH @EncodeDCC
ENCODE DCC retweeted
Interested in analyzing chromatin modifications and binding patterns of transcription factors and other proteins? Check out the ENCODE ChIP-Seq Pipeline 2 released on the Seven Bridges Cancer Genomics Cloud platform. @ENCODE_NIH @EncodeDCC
ENCODE DCC retweeted
Today we reached 130,000 #cellline entries in the #Cellosaurus. We tried to find a good image representing that number and found this picture of 130,000 spectators attending a mega concert of Madonna on August 29, 1987 at Parc de Sceaux near Paris
ENCODE DCC retweeted
I don’t think the long read community realizes how long PacBio cDNA reads can be with the right protocol & much higher quality thanks to CCS. The final @ENCODE_NIH long read dataset for human and mouse will be a treasure trove for the community!
Without NIH support ALL model organism databases-a crucial component of biomedical research-are threatened. Make your voice heard: surveymonkey.com/r/5NGLNNJ. Background info @ASCBiology @GeneticsGSA :ascb.org/wp-content/upl…
ENCODE DCC retweeted
GENCODE are excited to support international community efforts to produce reference annotation for human ORFs discovered by Ribo-seq. Preprint: bit.ly/2Ty4Mdo Website text: bit.ly/3iCFiX0
ENCODE DCC retweeted
Full details of how #LRAGSP Challenge 1 will be evaluated in thread below. See link for more info.
#LRAGSP Twitter thread of the week is about the evaluation of Challenge 1. Challenge 1 is transcript reconstruction using long reads when a well-annotated genome is available. More information about #LRGASP can be found at gencodegenes.org/pages/LRGASP/ 1/12 @GencodeGenes
ENCODE DCC retweeted
This is an infrastructure project. Join us gopetition.com/petitions/a-un… @anshulkundaje @ontowonka 16/16
ENCODE DCC retweeted
... full time data scientists and professionals, thousands - maybe millions of lines of code, and training. In particular, scientists will have to be re-trained to be more collaborative, more open, and more rigorous in detailing exactly how to reproduce their work. 15/x
ENCODE DCC retweeted
Preliminary findings and interesting data could be shared instantaneously with collaborators across the globe. This will never happen without top down organization. It would require equipment on the ground, computational clouds, ... 14/x
Anshul Kundaje @anshulkundaje
31K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Ming "Tommy" Tang @tangming2005
46K Followers 3K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Oxford Nanopore @nanopore
66K Followers 9K Following 🌍Direct DNA/RNA analysis for anyone, anywhere 🧬Short to ultra-long reads in real-time for rapid insights 🔬Products for research use only
Michael Hoffman @mich... @michaelhoffman
23K Followers 6K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre, @UHN. Assoc Prof, Medical Biophysics, University of Toronto. COI https://t.co/CvupKNIjZr
Aaron Quinlan @aaronquinlan
16K Followers 1K Following All things genome mutation, software for genomic discovery. Chairperson of @UUGenetics Co-director, DELPHI Data Science Init (he/him) https://t.co/6GKjALLFfk
Manolis Kellis @manoliskellis
47K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
Jacob Schreiber @jmschreiber91
5K Followers 1K Following Programmable Genomics Lab @UMassGCB, Technical Steering Committee @NumFOCUS. Prev @impvienna @StanfordMed. Studying genomics, ML, and fruit. Opinions my own.
Nature Genetics @NatureGenet
127K Followers 1K Following Nature Genetics is a monthly journal publishing high impact research in genetics and genomics. RT/like=interesting/relevant, not necessarily endorsement.
Ensembl @ensembl
29K Followers 248 Following The Ensembl project seeks to enable genomic science by providing high quality, integrated annotation.
Benoit Bruneau @benoitbruneau
9K Followers 2K Following Cardiovascular disease researcher, developmental biologist, and Oakland resident. Je cherche a comprendre.
Jason "boundless deli... @JasonWilliamsNY
6K Followers 4K Following Asst. Dir. @DNALC @CSHL/ @CyVerseOrg /@thecarpentries/#AreciboC3/ #Foodie #ClassicalMusic #StarTrek /lifescitrainers.org —my own opinions.
ASHG @GeneticsSociety
52K Followers 307 Following The American Society of Human Genetics (ASHG) is the world's largest professional membership organization for human genetics & genomics specialists.
Ash @arshiailaty
512 Followers 6K Following PhD @UCIrvine & @SDSU | EX-SWE-intern@Tesla گورستانِ ماه است شب!
spock @spock_29
3 Followers 84 Following
Akash Hosamani @MatrixTrend
18 Followers 236 Following Bioinformatics PhD | Python Working on computational genomics & CRISPR systems Building tools to make sense of biological data
Samir M7 Banbouk @banbouk_samir
45 Followers 1K Following حرب وقذائف متى تنتهي علمها عند الله رب العالمين
Sajal Malik @maliksajal1
44 Followers 2K Following If you want to learn something, read about it. If you want to understand something, write about it. If you want to master something, teach it. - Richard Feynma
BinarySplit @BinarySplit
12 Followers 146 Following
Barış Özmen @barisozmen_twi
290 Followers 2K Following Independent researcher. AI Applications, Cryptography, Programming Language Design Apps: https://t.co/dQFR4BxX8O
Kuai Yu @faai_jyu
4 Followers 29 Following
juxtaposition @silverloc123
2 Followers 64 Following
ramveer choudhary @ramveerc
147 Followers 1K Following Post doc at @ifom. DNA topology, NER/BER, RNAPII, XP and skin cancer ! Marie-Curie (ITN-aDDRess, ESR)IFOM Foundazione Istituto FIRC di Oncologia Moleculare
Izaskun Goñi Razquin @izaskungoni
1K Followers 879 Following Estrategia y desarrollo industrial. Comercio internacional y geopolítica. Ciudadana de la eurorregión N.Aquitania-Euskadi-Navarra. Autoridad Puerto Pasaia.
Bob Man @bob_man50430
1 Followers 169 Following
Víctor Sánchez Gaya @SanchezGaya
173 Followers 565 Following Bioinformatics & Biostatistics / @sanchezgaya.bsky.social /Developing POSTRE https://t.co/JBa5OQMs2N to improve human genetic diagnostics
iman_evil jeprut @evil_iman
71 Followers 446 Following
Jan Soroczynski @Jan_Soro
1K Followers 6K Following PhD Student in the Risca Lab @rockefelleruniv. Chromosomes, Chromatin and their Protein Partners. Boehringer Ingelheim Fonds Fellow. @StJohnsOx alum
Андрій Люби... @LjubychAndrij
16 Followers 576 Following https://t.co/XAf4S6fN5x https://t.co/mqgpd9ieYc
sadaf pervaiz @sadafperva70606
0 Followers 3 Following
Bgee database @Bgeedb
456 Followers 55 Following Database of gene expression @ISBSIB @unil Find us here: Bsky: @bgee.org Mastodon: @[email protected] LinkedIn: https://t.co/cynwqXFr2V
cfp @crlnfp
0 Followers 22 Following "clothe yourselves with compassion, kindness, humility, gentleness and patience" Colossians 3:12
Xiaomeng Fu @XiaomengFu81513
2 Followers 110 Following
Jeong Yun (John) Yang @JYangMD
179 Followers 663 Following Gastroenterology Fellow @ColumbiaMed interested in #cancerscreening #cancerprevention #epidemiology
Meng-Yun Wang @JoeyforWang
68 Followers 458 Following Postdoc at MPI @MPI_NL Chinese zodiac: 🐎|Favorite sport: ⛹️♂️|Daily life: 😂
🐯 @ez1fiz
0 Followers 260 Following
Qichen Fu @fuqichen1
76 Followers 619 Following Ph.D. candidate @WashUdbbs @WashUGenetics. Undergraduate @EdinburghUni @ZJU_China.
Nhat Truong Pham @nhattruong_pham
139 Followers 861 Following
“Namthip” Krittiy... @KuchikiNamthip
39 Followers 633 Following echo WET-DRY LAB TRANSFORMER //...in process! Follow Tommy's footsteps!
Sivasubramanian Raman... @DrSisuPark
90 Followers 1K Following Pursuing to ascent of next civilisation through Longevity, Regeneration and Molecular Medicine. I think and imagine at the speed and space of infinity
Age Reversal Unity @agereversaluni
1K Followers 7K Following Driving efforts to get the FDA to classify aging as a disease and expedite age related therapies to 9 months. Discord: https://t.co/sII66t7KWg.
Mandakini Singh @Mandaki09999485
0 Followers 93 Following
morescifi @morelifemoresci
1 Followers 3K Following
Michel "Mike" Choudal... @MChoudalakis
20 Followers 410 Following (Bio)Chemist. Finding answers by making solutions. John Arne Dahl group, Oslo @CRESCO_SFF_UiO |#Epigenetics #HistoneCode |#Heterochromatin #RepEnTools #Oocytes
Amruta Vartak @AmrutaVartak
8 Followers 28 Following Imaging of Cholestasis associated liver disorders
Xiong Weng @weng_xiong
53 Followers 251 Following PhD in adipocyte biology @kang_lab @dundeeuni and postdoc studying lipodystrophy @ Prof.Robert Semple's lab @ CVS @EdinburghUni
David vs Goliath 🌍 @Bibfactor
3K Followers 658 Following 1. Open your hearts and follow Jesus. Because Jesus is the only influencer who actually resurrects his followers! 2. Pray For Humanity 🙏 #healing
Haikuo Li @HaikuoLi
464 Followers 765 Following We study kidney injury and fibrosis, single-cell & spatial omics and epigenetics
Anshul Kundaje @anshulkundaje
31K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Ewan Birney @ewanbirney
47K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
bioRxiv @biorxivpreprint
141K Followers 23 Following Daily summaries of preprints posted in each bioRxiv Subject Area. Find ways to get social media alerts to individual papers at https://t.co/wrlEW1phDV
National Human Genome... @genome_gov
80K Followers 379 Following Funding research at the forefront of genomics to improve human health. Formerly the Human Genome Project. https://t.co/4hdQRFkFNU
Oxford Nanopore @nanopore
66K Followers 9K Following 🌍Direct DNA/RNA analysis for anyone, anywhere 🧬Short to ultra-long reads in real-time for rapid insights 🔬Products for research use only
Michael Hoffman @mich... @michaelhoffman
23K Followers 6K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre, @UHN. Assoc Prof, Medical Biophysics, University of Toronto. COI https://t.co/CvupKNIjZr
Aaron Quinlan @aaronquinlan
16K Followers 1K Following All things genome mutation, software for genomic discovery. Chairperson of @UUGenetics Co-director, DELPHI Data Science Init (he/him) https://t.co/6GKjALLFfk
Nature Portfolio @NaturePortfolio
2.1M Followers 2K Following Nature Portfolio’s high-quality products and services across the life, physical, chemical and applied sciences is dedicated to serving the scientific community.
Arjun Raj @arjunrajlab
47K Followers 2K Following Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12
Manolis Kellis @manoliskellis
47K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
dana_peer @dana_peer
15K Followers 166 Following
Yoav Gilad @Y_Gilad
8K Followers 486 Following Dean for Biomedical and Health Informatics. Professor of Medicine and Human Genetics. Chief of Genetic Medicine. University of Chicago
Nature Genetics @NatureGenet
127K Followers 1K Following Nature Genetics is a monthly journal publishing high impact research in genetics and genomics. RT/like=interesting/relevant, not necessarily endorsement.
Genome Biology @GenomeBiology
88K Followers 440 Following Tweets about latest articles in the journal Genome Biology, conferences & more. Part of @SpringerNature. Also read our blogs (https://t.co/7GgHTUIKaX).
Michael 英泉 Eisen @mbeisen
73K Followers 13K Following I science & try to make science open. Tweets do not represent my employer's views, but are always correct. My conflicts of interest https://t.co/77P0LDe6VR.
Ensembl @ensembl
29K Followers 248 Following The Ensembl project seeks to enable genomic science by providing high quality, integrated annotation.
Steven Salzberg 💙�... @StevenSalzberg1
19K Followers 256 Following Bloomberg Distinguished Professor of BME, CS, and Biostats at Johns Hopkins Univ., tennis player, https://t.co/xwqVB2TYkL, @stevensalzberg.bsky.social
Nature Reviews Geneti... @NatureRevGenet
93K Followers 1 Following Publishing reviews and commentaries across the fields of genetics and genomics. Part of @SpringerNature and @NaturePortfolio.
bioRxiv Genomics @biorxiv_genomic
12K Followers 0 Following
𝄃𝄃𝄂𝄂𝄀�... @the_yaniv
32K Followers 789 Following
Hannah Happ @HC_Happ
342 Followers 678 Following Postdoc in @aaronquinlan lab | PhD alum of @CarvillLab | 🧬🧠👩🏼🔬 ➡️ 🧬👩🏼💻 | she/her
Benjamin James @__ben_james__
154 Followers 858 Following Ph.D student studying computational biology with @manoliskellis at @MIT_CSAIL @BroadInstitute | BS ‘19 @utulsa Views are my own.
Anil kumar @VashapakaAnil
27 Followers 398 Following Research Scholar, Osmania University @osmania1917
Katherine Antel 🇿�... @katherineantel
122 Followers 322 Following Clin Haem. MD, PHD | Lymphoma research | Runner, reader, explorer, dreamer | Views are my own | she/her 🏳️🌈
Brian @brianjjoslin
234 Followers 2K Following Engineer and apologist. A life spent searching for the Truth is the best life. #iamblessed
Jane Xu @DrJaneXu
267 Followers 351 Following PhD 👩🔬 Trying to loop around chromatin biology in stem cell & leukemia🩸Postdoc @cohesinlab 🧫 Marathon runner 🏃♀️ Bouldering 🧗♀️ Australian 🇦🇺
darked @darked
397 Followers 1K Following bioinformatics/Linux NGS, Slurm, AWS, Singularity views are my own
brent pedersen @brent_p
5K Followers 1K Following computational biologist. Building humane tools for large-scale genomics and rare-disease. Contact me if you have genomics/bioinformatics contracting work.
Feng Yue @yuefeng_1
3K Followers 306 Following Director, Center for Cancer Genomics, Professor of Biochemistry & Molecular Genetics, Professor of Pathology Northwestern University
Henry Wong @DiscountDimSum
101 Followers 749 Following Computational Bio/Security researcher, UW CSE PhD
Henry Pratt @hpratt111
40 Followers 144 Following MD/PhD student in bioinformatics and computational biology, @umassmed_zlab
CancerGenomicsCloud @genomicscloud
1K Followers 235 Following A @velsera project enabling cancer multiomics research at petabyte scale.
Seven Bridges @SevenBridges
3K Followers 816 Following Seven Bridges enables researchers to discover like never before with a complete bioinformatics ecosystem.
Zhanlin (Flynn) Chen @FlynnChen7
107 Followers 173 Following Northwestern⚕️'26, Yale 🧬💻+📈, ex-NASA JPL 347J🦾, @PDSoros fellow, ☕ lover, walking talking goof🏀 hence views are my own.
bioinfoUGR @bioinfoUGR
58 Followers 45 Following Computational Epigenomics Lab Evolutionary Genomics and Bioinformatics Group.
Adrian Brueckner @AdrianBrueckner
358 Followers 824 Following German in LA. Dog dad. Biotech. Husband. He/Him/His 🏳️🌈
BreakthroughMedicine&... @JayChance12
620 Followers 5K Following #biotechnology #policy #risk #prevention #mitigation #epidemiology #management #medicine #resilience #coronavirus #SARSCov2 #COVID19 21stMed
Rob Fullem @rob_fullem
79 Followers 1K Following computational biology PhD @bcmhouston Previously @genome_gov & @RutgersU Views shared here are my own.
Richard Norris @rnorris1620
69 Followers 197 Following Research Fellow in Computational Biology. Snowboarder, love the mountains!
Jose c. Reyes @JCReyes_lab
319 Followers 128 Following CSIC Research Investigator at @Cabimer. Working on chromatin and epigenetics. Leading the Epigenetics and Gene Expression Group
Oliver Coombs OBrien @Coombs_OBrien
126 Followers 539 Following PhD student MRC Precision Medicine DTP - University of Edinburgh. Klebsiella pneumoniae zebrafish gut interactions Specialist editor and writer at theGIST
claudia del carmen ay... @claudia52140979
42 Followers 338 Following Nutrióloga y doctorante en ciencias en la Universidad Autónoma de Yucatán. Docente en nivel universitario.
Jin Xu @jinxu9
61 Followers 97 Following
MaizeCODE Project @maizecode
82 Followers 56 Following From linear genome sequence to active regions and beyond: A systematic study of maize genomes.
Van Nostrand Lab @EVanNostrandLab
568 Followers 58 Following Eric Van Nostrand's Lab at Baylor College of Medicine. We study RNA processing and RNA binding proteins, using genomics and computational approaches.
Neil Sharpe @NeilSharpeGenes
50 Followers 128 Following Medical Genetics/Genetic Counsellng, Musician, Fine Art Photography
Cole Trapnell @coletrapnell
11K Followers 175 Following working on single cell genomics & developmental genetics at @uwgenome. co-founder, @scalebio
Riccardo Privolizzi @Dr_RickPrivo
408 Followers 757 Following Senior Research Fellow, Associate Lecturer @UCL | AAV, Promoters & GREs | PhD CNS #GeneTherapy | @_BSGCT Board ECR | Teaching, science comm. | 🧬🧠☀️🏊♂️🦖
Alexandra Tuzova, PhD @AlexandraTuzova
108 Followers 560 Following
FJ Campos-Laborie @FjLaborie
156 Followers 702 Following Over 10y experience creating bugs | #bioinformatics #compbio | #machinelearning #datalover #rstats #python
Ken Chen @chenkenbio
30 Followers 520 Following Machine learning and computational biology. Postdoc @uchicago
Eyal Metzl-Raz @EyalMR
309 Followers 578 Following @HFSP Postdoc fellow, @WJGreenleaf, @Stanford. @BarkaiLab alumnus. Interested in iPSCs, differentiation, basic science, systems biology.
Genomics Gurus @GenomicsGurus
127 Followers 115 Following Genomics Gurus - a new YouTube channel and Twitter feed for genome research and therapy. Hosted by @chromatingroup and @epigeneticsguru, @UofGMVLS, @UofGlasgow
The Boyle Lab @theboylelab
97 Followers 51 Following The Boyle Lab is part of the Departments of Computational Medicine & Bioinformatics and Human Genetics at the University of Michigan
Calico @calico
8K Followers 40 Following Calico is a research and development company tackling one of life's greatest mysteries, the biology that controls human aging.
InterPro @InterProDB
2K Followers 2K Following InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites
Alliance of Genome Re... @alliancegenome
764 Followers 139 Following The Alliance of Genome Resources supports comparative biology of human and model organisms via data integration, metadata standards, and common user interfaces.
Human Cell Atlas @humancellatlas
19K Followers 550 Following MISSION To create comprehensive reference maps of all human cells as a basis for both understanding human health and diagnosing, monitoring and treating disease
4DN DCIC @4dn_dcic
273 Followers 86 Following Data Coordination and Integration Center for the 4D Nucleome Project.
Angel @delagoya
2K Followers 3K Following Principal Dev Advocate, HPC @ AWS. ✊🏽🇵🇷 (he/him). 🐘 delagoya Opinions are my own.
Anastasios Mastrokoli... @neurogeneticus
3K Followers 209 Following Postdoctoral research scientist - Science does work ... !
Mike Cormier, PhD, MS @dr_mikecormier
106 Followers 172 Following Bioinformatics Scientist. Focused on improving the diagnosis and treatment of genetic diseases using computational and statistical methods. Opinions are my own
zkwu @wuzhikun88
2 Followers 90 FollowingYou might like
UCSC Genome Browser
@GenomeBrowser
19K Followers
Ensembl
@ensembl
29K Followers
Broad Institute
@broadinstitute
100K Followers
Genome Research
@genomeresearch
54K Followers
Wellcome Sanger Insti...
@sangerinstitute
71K Followers
William J. Greenleaf
@WJGreenleaf
11K Followers
NY Genome Center
@nygenome
40K Followers
Anshul Kundaje
@anshulkundaje
31K Followers
Human Genome Org
@humangenomeorg
28K Followers
Gene Regulation
@generegulation
14K Followers
Mark Gerstein
@MarkGerstein
8K Followers
Michael Hoffman @mich...
@michaelhoffman
23K Followers
Ewan Birney
@ewanbirney
47K Followers
UC Santa Cruz Genomic...
@ucscgenomics
6K Followers
GTEx Portal
@GTExPortal
1K Followers